STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010265Calcium channel, voltage-dependent, beta 3a. (266 aa)    
Predicted Functional Partners:
ENSGMOP00000003468
annotation not available
    
  0.857
ENSGMOP00000017459
annotation not available
    
  0.857
ENSGMOP00000017473
Protein phosphatase 2, catalytic subunit, alpha isozyme.
    
  0.856
ENSGMOP00000019916
annotation not available
    
  0.856
ENSGMOP00000000268
Protein phosphatase 2, regulatory subunit B', alpha isoform.
    
  0.855
ENSGMOP00000006378
Protein phosphatase 2, regulatory subunit B', beta.
    
  0.855
ENSGMOP00000010033
Protein phosphatase 2, regulatory subunit B', epsilon isoform a.
    
  0.855
ENSGMOP00000000686
annotation not available
   
 
  0.846
ENSGMOP00000005962
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1.
   
 
  0.845
PPP2R5C
Protein phosphatase 2 regulatory subunit B'gamma.
    
  0.841
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.