ENSGMOP00000010312 protein (Gadus morhua) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGMOP00000010312

annotation not available (165 aa)

Predicted Functional Partners:

ENSGMOP00000009542

0.753

ENSGMOP00000020591

0.625

ENSGMOP00000020597

0.625

ENSGMOP00000014534

0.614

ENSGMOP00000019906

0.614

pdcd6

0.551

GCA

0.551

CAPNS1

0.551

ENSGMOP00000007525

0.551

ENSGMOP00000012015

0.551

Your Current Organism:

Gadus morhua

NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAPNS1	ENSGMOP00000009542	ENSGMOP00000006301	ENSGMOP00000009542	Calpain small subunit 1.	annotation not available	0.947
CAPNS1	ENSGMOP00000010312	ENSGMOP00000006301	ENSGMOP00000010312	Calpain small subunit 1.	annotation not available	0.551
ENSGMOP00000007525	ENSGMOP00000009542	ENSGMOP00000007525	ENSGMOP00000009542	penta-EF-hand domain containing 1.	annotation not available	0.819
ENSGMOP00000007525	ENSGMOP00000010312	ENSGMOP00000007525	ENSGMOP00000010312	penta-EF-hand domain containing 1.	annotation not available	0.551
ENSGMOP00000009542	CAPNS1	ENSGMOP00000009542	ENSGMOP00000006301	annotation not available	Calpain small subunit 1.	0.947
ENSGMOP00000009542	ENSGMOP00000007525	ENSGMOP00000009542	ENSGMOP00000007525	annotation not available	penta-EF-hand domain containing 1.	0.819
ENSGMOP00000009542	ENSGMOP00000010312	ENSGMOP00000009542	ENSGMOP00000010312	annotation not available	annotation not available	0.753
ENSGMOP00000009542	ENSGMOP00000012015	ENSGMOP00000009542	ENSGMOP00000012015	annotation not available	Calpain, small subunit 1 b.	0.947
ENSGMOP00000009542	GCA	ENSGMOP00000009542	ENSGMOP00000004329	annotation not available	Grancalcin.	0.820
ENSGMOP00000009542	pdcd6	ENSGMOP00000009542	ENSGMOP00000001997	annotation not available	Programmed cell death 6.	0.819
ENSGMOP00000010312	CAPNS1	ENSGMOP00000010312	ENSGMOP00000006301	annotation not available	Calpain small subunit 1.	0.551
ENSGMOP00000010312	ENSGMOP00000007525	ENSGMOP00000010312	ENSGMOP00000007525	annotation not available	penta-EF-hand domain containing 1.	0.551
ENSGMOP00000010312	ENSGMOP00000009542	ENSGMOP00000010312	ENSGMOP00000009542	annotation not available	annotation not available	0.753
ENSGMOP00000010312	ENSGMOP00000012015	ENSGMOP00000010312	ENSGMOP00000012015	annotation not available	Calpain, small subunit 1 b.	0.551
ENSGMOP00000010312	ENSGMOP00000014534	ENSGMOP00000010312	ENSGMOP00000014534	annotation not available	Intersectin 2b.	0.614
ENSGMOP00000010312	ENSGMOP00000019906	ENSGMOP00000010312	ENSGMOP00000019906	annotation not available	Intersectin 2a.	0.614
ENSGMOP00000010312	ENSGMOP00000020591	ENSGMOP00000010312	ENSGMOP00000020591	annotation not available	annotation not available	0.625
ENSGMOP00000010312	ENSGMOP00000020597	ENSGMOP00000010312	ENSGMOP00000020597	annotation not available	annotation not available	0.625
ENSGMOP00000010312	GCA	ENSGMOP00000010312	ENSGMOP00000004329	annotation not available	Grancalcin.	0.551
ENSGMOP00000010312	pdcd6	ENSGMOP00000010312	ENSGMOP00000001997	annotation not available	Programmed cell death 6.	0.551