STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010320Wu:fj05g07. (563 aa)    
Predicted Functional Partners:
ENSGMOP00000017956
3-phosphoinositide dependent protein kinase 1b.
    
 0.860
ENSGMOP00000014099
Regulatory associated protein of MTOR, complex 1.
    
 0.855
ENSGMOP00000012309
MAPK associated protein 1.
    
 0.847
rps6
Ribosomal protein S6.
    
 0.824
ENSGMOP00000010431
Mechanistic target of rapamycin kinase.
    
 0.818
ENSGMOP00000013281
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
    
 0.818
ENSGMOP00000019534
Protein kinase, DNA-activated, catalytic subunit.
    
 0.818
ENSGMOP00000018142
RPTOR independent companion of MTOR, complex 2 a.
    
 0.796
ENSGMOP00000020635
annotation not available
    
 0.796
ENSGMOP00000011404
TSC complex subunit 2.
    
 0.737
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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