STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010334Hydrogen voltage-gated channel 1. (209 aa)    
Predicted Functional Partners:
ENSGMOP00000006257
Protein phosphatase 1, catalytic subunit, alpha isozyme b.
 
  
 0.613
LOC115545230
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
 
  
 0.613
ENSGMOP00000014490
Protein phosphatase 1, catalytic subunit, alpha isozyme a.
 
  
 0.612
ENSGMOP00000015200
annotation not available
 
  
 0.610
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
 
  
 0.608
LOC115543833
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
 
  
 0.608
ENSGMOP00000016504
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.554
MLKL
Mixed lineage kinase domain like pseudokinase.
    
  0.536
ENSGMOP00000020396
UDP-galactose-4-epimerase.
     
 0.511
ENSGMOP00000018949
Glucosidase, beta (bile acid) 2.
    
  0.507
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.