STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010409Nitrilase 1. (282 aa)    
Predicted Functional Partners:
ENSGMOP00000006159
Sorbitol dehydrogenase.
  
 0.858
ENSGMOP00000001662
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.851
ENSGMOP00000017263
Holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase).
    
 0.823
ENSGMOP00000000358
NAD synthetase 1.
    
 0.815
CBS
Cystathionine beta-synthase.
  
 0.814
QPRT
Quinolinate phosphoribosyltransferase.
  
 
 0.811
sms
Spermine synthase.
  
 
 0.795
ENSGMOP00000009520
Spermidine synthase.
  
 
 0.795
ENSGMOP00000010004
succinate-CoA ligase, alpha subunit.
  
 0.788
ENSGMOP00000007097
annotation not available
  
 0.787
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.