STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTC1Actin alpha cardiac muscle 1. (276 aa)    
Predicted Functional Partners:
ENSGMOP00000013181
Myb-like, SWIRM and MPN domains 1.
    
 0.918
actl6a
Actin like 6A.
 
  
0.832
ENSGMOP00000008562
Dynactin 2 (p50).
    
 0.830
arpc3
Actin related protein 2/3 complex subunit 3.
   
 0.829
ENSGMOP00000011600
Actin related protein 2/3 complex, subunit 5B.
   
 0.828
capzb
Capping actin protein of muscle Z-line subunit beta.
   
 0.827
actr8
Actin related protein 8.
    
 0.823
dctn4
Dynactin subunit 4.
    
 0.822
dctn5
Dynactin subunit 5.
    
 0.822
ENSGMOP00000002700
Myosin IIIB.
    
 0.816
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.