STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010649Fibronectin type III domain containing 4a. (207 aa)    
Predicted Functional Partners:
ENSGMOP00000014007
All-trans retinoic acid-induced differentiation factor.
      
 0.471
ENSGMOP00000012137
Calcitonin gene-related peptide-receptor component protein.
      
 0.463
ENSGMOP00000019580
Activating signal cointegrator 1 complex subunit 3.
      
 0.457
ENSGMOP00000013997
Eukaryotic translation initiation factor 2B, subunit 4 delta.
      
 0.408
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.