STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010695Fer-1 like family member 6. (1598 aa)    
Predicted Functional Partners:
cav1
Caveolin 1.
    
 0.537
LOC115553882
Vesicle-associated membrane protein 2-like.
     
 0.516
ENSGMOP00000018608
Vesicle-associated membrane protein 2.
     
 0.516
ENSGMOP00000004044
Solute carrier family 17 member 8.
     
 0.456
ENSGMOP00000008441
Caveolin 3.
   
 0.416
ENSGMOP00000003266
annotation not available
     
 0.407
ENSGMOP00000019934
Solute carrier family 17 member 6a.
     
 0.407
SLC17A6
Solute carrier family 17 member 6.
     
 0.407
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.