STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010706Transmembrane protein 184bb. (417 aa)    
Predicted Functional Partners:
gabarapl2
GABA type A receptor associated protein like 2.
    
   0.659
ENSGMOP00000008364
GABA(A) receptor-associated protein b.
    
   0.659
ENSGMOP00000008451
annotation not available
    
   0.659
ENSGMOP00000012641
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.620
ENSGMOP00000003163
Potassium channel tetramerization domain containing 2.
    
   0.601
LOC115538019
SUMO-conjugating enzyme UBC9-like.
    
   0.601
ube2i
Ubiquitin conjugating enzyme E2 I.
    
   0.601
LOC115554263
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
   0.599
map1lc3c
Microtubule associated protein 1 light chain 3 gamma.
    
   0.599
ENSGMOP00000012494
Microtubule-associated protein 1 light chain 3 alpha.
    
   0.599
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.