STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010728annotation not available (492 aa)    
Predicted Functional Partners:
ENSGMOP00000010089
Primase and polymerase (DNA-directed).
    
 
 0.974
rpa3
Replication protein A3.
    
 0.968
ENSGMOP00000011113
Replication protein A1.
   
 0.960
ENSGMOP00000002363
Beta-2-microglobulin, like.
   
 0.876
ENSGMOP00000016869
Replication protein A2.
   
 0.876
pcna
Proliferating cell nuclear antigen.
  
 0.870
ENSGMOP00000002246
annotation not available
  
 0.856
ruvbl1
RuvB like AAA ATPase 1.
    
 0.791
ENSGMOP00000003755
Actin related protein 5.
    
 0.789
ENSGMOP00000001842
STN1 subunit of CST complex.
   
 0.787
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.