STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010742Si:dkey-217f16.6. (765 aa)    
Predicted Functional Partners:
ENSGMOP00000010207
Argonaute RISC component 4.
    
 0.833
ENSGMOP00000013986
Argonaute RISC catalytic component 3a.
    
 0.833
ENSGMOP00000014607
Argonaute RISC catalytic component 2.
    
 0.833
ENSGMOP00000020885
Argonaute RISC component 1.
    
 0.833
ENSGMOP00000020893
Argonaute RISC catalytic component 3a.
    
 0.817
ENSGMOP00000013780
CCR4-NOT transcription complex, subunit 1.
    
 
 0.797
ENSGMOP00000013494
CCR4-NOT transcription complex subunit 9.
    
 
 0.644
ENSGMOP00000005720
CCR4-NOT transcription complex, subunit 3a.
    
 
 0.561
ENSGMOP00000015250
Decapping mRNA 1A.
    
 
 0.538
ENSGMOP00000006840
5'-3' exoribonuclease 1.
   
  
 0.509
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.