STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pptc7PTC7 protein phosphatase homolog. (297 aa)    
Predicted Functional Partners:
ENSGMOP00000006581
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.661
ENSGMOP00000000799
Mitochondrial methionyl-tRNA formyltransferase.
  
   0.650
ENSGMOP00000014903
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
   
 0.650
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.649
ENSGMOP00000015412
annotation not available
   
 0.630
ENSGMOP00000015728
Pyruvate dehyrogenase phosphatase catalytic subunit 1.
    
 
 0.623
ENSGMOP00000019829
Putative pyruvate dehydrogenase phosphatase isoenzyme 2.
    
 
 0.623
ENSGMOP00000000302
Pyruvate dehydrogenase E1 beta subunit.
   
 0.597
ENSGMOP00000006819
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.597
ENSGMOP00000015040
Mitogen-activated protein kinase kinase 7.
    
  0.596
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.