STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010916RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae). (388 aa)    
Predicted Functional Partners:
ENSGMOP00000002246
annotation not available
    
 0.999
ENSGMOP00000002392
DNA topoisomerase III alpha.
    
 0.999
ENSGMOP00000005012
RecQ mediated genome instability 2.
    
 0.999
ENSGMOP00000011113
Replication protein A1.
    
 0.993
rpa3
Replication protein A3.
    
 0.991
ENSGMOP00000017419
DNA topoisomerase III beta.
    
 0.988
ENSGMOP00000016869
Replication protein A2.
   
 0.969
ENSGMOP00000002363
Beta-2-microglobulin, like.
   
 0.966
ENSGMOP00000019954
FA complementation group F.
    
 
 0.966
ENSGMOP00000003809
annotation not available
    
 
 0.955
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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