STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (522 aa)    
Predicted Functional Partners:
LOC115533208
Myosin light chain 1, skeletal muscle isoform-like.
   
 
 0.668
ENSGMOP00000005862
Nebulin-related anchoring protein.
   
 0.641
ENSGMOP00000014411
Nebulin.
   
 0.640
ENSGMOP00000020701
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
  
 0.567
ENSGMOP00000008213
Myozenin 2a.
   
  
 0.540
ENSGMOP00000013356
Myozenin 2b.
   
  
 0.540
LOC115531088
Myosin regulatory light chain 2, skeletal muscle isoform-like.
   
 
 0.536
ENSGMOP00000007567
annotation not available
   
 
 0.524
TNNT1
Troponin T1, slow skeletal type.
   
 
 0.524
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 
 0.511
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.