STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010943Oxysterol binding protein 2. (734 aa)    
Predicted Functional Partners:
ENSGMOP00000013246
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.741
LOC115557502
Vesicle-associated membrane protein-associated protein B-like.
    
 0.741
ENSGMOP00000006515
annotation not available
    
 0.727
ENSGMOP00000017805
Cyclin G associated kinase.
   
 
 0.528
ENSGMOP00000005233
Valosin containing protein.
   
  0.430
ENSGMOP00000011826
annotation not available
   
  0.422
ENSGMOP00000016120
Spermatogenesis associated 5-like 1.
   
  0.422
ENSGMOP00000004076
annotation not available
    
  0.420
ENSGMOP00000004330
Gse1 coiled-coil protein.
    
  0.420
ENSGMOP00000006215
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 
 0.412
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.