STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000011241Interferon-related developmental regulator 2. (435 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
  0.996
ENSGMOP00000012733
Ribosomal protein S27a.
    
  0.926
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.925
commd2
COMM domain containing 2.
    
 0.891
ENSGMOP00000015767
Copper metabolism (Murr1) domain containing 1.
    
 0.888
COMMD10
COMM domain containing 10.
   
 0.872
ENSGMOP00000016033
Coiled-coil domain containing 22.
    
 0.858
rpl8
Ribosomal protein L8.
   
 
 0.838
rpl18a
Ribosomal protein L18a.
    
 
 0.834
ENSGMOP00000014746
Ribosomal protein S7.
    
 
 0.828
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.