STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000011508annotation not available (753 aa)    
Predicted Functional Partners:
ENSGMOP00000000295
annotation not available
   
 0.749
SMAD4
SMAD family member 4.
   
 0.749
ENSGMOP00000014927
SMAD family member 4b.
   
 0.749
ENSGMOP00000001376
annotation not available
    
 0.738
smad2
SMAD family member 2.
    
 0.738
LOC115551191
Mothers against decapentaplegic homolog 3-like.
    
 0.738
ENSGMOP00000012733
Ribosomal protein S27a.
    
  0.726
ENSGMOP00000020436
annotation not available
   
 
 0.724
ENSGMOP00000008292
Anaphase promoting complex subunit 4.
   
   0.681
ENSGMOP00000014676
Cell division cycle 27.
   
  0.678
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.