STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000011583annotation not available (1893 aa)    
Predicted Functional Partners:
ENSGMOP00000009303
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.998
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.994
ENSGMOP00000000519
Polymerase (RNA) II (DNA directed) polypeptide G-like.
   
 0.992
POLR2E
RNA polymerase II subunit E.
   
  0.992
ENSGMOP00000010653
Polymerase (RNA) II (DNA directed) polypeptide F.
  
 0.992
ENSGMOP00000000253
annotation not available
   
 0.991
polr2l
RNA polymerase II subunit L.
    
  0.991
polr2j
RNA polymerase II subunit J.
    
  0.991
ENSGMOP00000007553
RAN binding protein 2.
   
 0.987
mnat1
MNAT1 component of CDK activating kinase.
    
 0.984
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.