STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000011684Upstream transcription factor 1. (296 aa)    
Predicted Functional Partners:
ENSGMOP00000014216
Upstream transcription factor 2, c-fos interacting.
  
 
0.958
ENSGMOP00000010459
annotation not available
  
 
0.957
ENSGMOP00000001368
Sp1 transcription factor.
    
 0.760
CREBBP
CREB binding protein.
    
 0.726
ENSGMOP00000016192
CREB binding protein a.
    
 0.726
ENSGMOP00000002321
E1A binding protein p300 b.
    
 0.725
ENSGMOP00000014409
E1A binding protein p300 a.
    
 0.725
ENSGMOP00000006796
CCCTC-binding factor (zinc finger protein).
    
 0.636
TYR
Tyrosinase.
    
 
 0.604
ENSGMOP00000004683
Tyrosinase.
    
 
 0.602
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.