STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000011689Nuclear factor of activated T cells 4. (412 aa)    
Predicted Functional Partners:
ENSGMOP00000000960
annotation not available
    
 0.915
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.908
ENSGMOP00000012733
Ribosomal protein S27a.
   
  0.908
ENSGMOP00000000456
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.887
ENSGMOP00000014402
Protein phosphatase 3, catalytic subunit, beta isozyme.
   
 0.884
ENSGMOP00000008618
annotation not available
   
 0.882
ENSGMOP00000014374
Nuclear factor of activated T cells 1.
  
 
0.865
ENSGMOP00000003969
Nuclear factor of activated T cells 2a.
  
 
0.864
ENSGMOP00000018290
Nuclear factor of activated T cells 3a.
    
 
0.862
NFATC1
Nuclear factor of activated T cells 1.
    
0.854
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.