STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000011744Synaptophysin-like 2a. (218 aa)    
Predicted Functional Partners:
LOC115553882
Vesicle-associated membrane protein 2-like.
   
 0.645
ENSGMOP00000018608
Vesicle-associated membrane protein 2.
   
 0.645
ENSGMOP00000000055
N-acetylneuraminic acid synthase a.
     
 0.622
ENSGMOP00000000046
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.604
VAMP3
Vesicle associated membrane protein 3.
   
 0.524
ENSGMOP00000005097
Meiosis 1 associated protein.
     
 0.516
ENSGMOP00000020263
N-acetylglucosamine kinase.
     
 0.516
ENSGMOP00000012728
4-hydroxy-2-oxoglutarate aldolase 1.
   
 
  0.509
ENSGMOP00000019704
N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase).
   
 
  0.509
ENSGMOP00000013293
Synaptosome associated protein 25a.
   
 0.507
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.