STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000011810N-ethylmaleimide-sensitive factor attachment protein, beta b. (298 aa)    
Predicted Functional Partners:
ENSGMOP00000009575
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.964
ENSGMOP00000009491
Syntaxin 5A.
    
 0.954
ENSGMOP00000006586
Sec1 family domain containing 1.
    
 0.952
ENSGMOP00000016395
Syntaxin 16.
    
 0.952
ykt6
YKT6 v-SNARE homolog.
    
 0.951
ENSGMOP00000020678
N-ethylmaleimide-sensitive factor a.
   
 0.943
ENSGMOP00000020682
N-ethylmaleimide-sensitive factor b.
   
 0.943
VAMP3
Vesicle associated membrane protein 3.
   
 0.923
LOC115553882
Vesicle-associated membrane protein 2-like.
    
 0.921
ENSGMOP00000018608
Vesicle-associated membrane protein 2.
    
 0.921
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.