STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000011960annotation not available (86 aa)    
Predicted Functional Partners:
ASF1B
Histone chaperone asf1b-B.
   
 
 0.952
ENSGMOP00000016478
Chromatin assembly factor 1, subunit A (p150).
   
 
 0.933
CHAF1B
Chromatin assembly factor 1 subunit B.
 
      0.900
pcna
Proliferating cell nuclear antigen.
   
 
 0.882
ENSGMOP00000005214
Retinoblastoma binding protein 4, like.
   
 
 0.836
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 
 0.836
ENSGMOP00000012523
annotation not available
   
 
 0.836
cdc45
Cell division cycle 45.
   
  
 0.789
ENSGMOP00000005255
Insulin induced gene 1.
    
 
 0.766
ENSGMOP00000019657
Insulin induced gene 2.
    
 
 0.766
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.