STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012054annotation not available (137 aa)    
Predicted Functional Partners:
ENSGMOP00000004222
Lysine (K)-specific demethylase 6B, a.
   
 0.927
ENSGMOP00000005013
annotation not available
   
 0.927
ENSGMOP00000007617
Lysine (K)-specific demethylase 6A.
   
 0.927
ENSGMOP00000009303
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.845
ENSGMOP00000009364
DOT1-like histone H3K79 methyltransferase.
   
 0.837
ENSGMOP00000018314
annotation not available
   
 0.837
ENSGMOP00000010770
Retinoblastoma binding protein 5.
    
 0.830
ENSGMOP00000016489
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.826
ENSGMOP00000002401
Histone acetyltransferase 1.
   
 0.824
ENSGMOP00000016854
M-phase phosphoprotein 8.
    
 0.819
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.