STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012080Myosin VIIAb. (2159 aa)    
Predicted Functional Partners:
ENSGMOP00000005181
Usher syndrome 1C.
   
 0.761
ENSGMOP00000009391
Usher syndrome 1Ga (autosomal recessive).
   
 0.701
ENSGMOP00000011466
Usher syndrome 1Gb (autosomal recessive).
   
 0.701
ENSGMOP00000009471
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.674
ENSGMOP00000002078
DCC netrin 1 receptor.
    
  0.654
ENSGMOP00000009069
Neogenin 1b.
    
  0.654
ENSGMOP00000000425
annotation not available
    
 0.649
ENSGMOP00000001758
Whirlin a.
    
 0.649
ENSGMOP00000000869
annotation not available
    
 0.624
ENSGMOP00000007323
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
    
 0.624
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.