STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012192Caveolin 2. (156 aa)    
Predicted Functional Partners:
ENSGMOP00000008441
Caveolin 3.
  
0.997
cav1
Caveolin 1.
  
0.994
ENSGMOP00000001606
annotation not available
    
 0.883
ENSGMOP00000015899
Nitric oxide synthase 1 (neuronal).
    
 0.883
ENSGMOP00000013931
V-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog.
    
 0.882
ENSGMOP00000013958
annotation not available
    
 0.882
LOC115544021
Tyrosine-protein kinase fyna.
    
 0.878
ENSGMOP00000009047
Calmodulin-like 4a.
    
 0.874
ENSGMOP00000002750
annotation not available
    
 0.847
HSP90B1
Heat shock protein 90 beta family member 1.
    
 0.847
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.