STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012207E4F transcription factor 1. (648 aa)    
Predicted Functional Partners:
ENSGMOP00000005330
annotation not available
    
  0.871
ENSGMOP00000005370
annotation not available
    
  0.871
ENSGMOP00000018072
Ankyrin repeat and sterile alpha motif domain containing 3.
   
  0.820
ENSGMOP00000018095
WD repeat domain 24.
   
 
  0.811
ENSGMOP00000006516
BRCA1-associated ATM activator 1.
   
    0.762
ENSGMOP00000006998
Zinc finger, CCCH-type with G patch domain.
   
   0.761
ENSGMOP00000008291
Tumor protein p53.
   
 0.740
ENSGMOP00000020902
Si:ch73-174h16.4.
   
    0.614
ENSGMOP00000010713
NME/NM23 family member 8.
    
 0.606
ENSGMOP00000014854
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
   
   0.597
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.