STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmbim6Transmembrane BAX inhibitor motif containing 6. (237 aa)    
Predicted Functional Partners:
ENSGMOP00000008748
Desumoylating isopeptidase 1a.
    
   0.901
ENSGMOP00000009859
Desumoylating isopeptidase 1b.
    
   0.901
ENSGMOP00000005480
BCL2 associated X, apoptosis regulator a.
    
 0.847
ENSGMOP00000015924
annotation not available
    
 0.830
ENSGMOP00000000894
annotation not available
    
   0.741
DESI2
Desumoylating isopeptidase 2.
    
   0.741
ENSGMOP00000003585
BCL2 apoptosis regulator b.
    
 0.725
ENSGMOP00000006282
Presenilin 1.
    
 
 0.721
ENSGMOP00000012639
Presenilin 2.
    
 
 0.721
GHITM
Growth hormone inducible transmembrane protein.
   
  
0.671
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.