STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012372Transducin (beta)-like 3. (808 aa)    
Predicted Functional Partners:
ENSGMOP00000000649
Nucleolar protein 6 (RNA-associated).
   
 0.999
ENSGMOP00000000756
BMS1 ribosome biogenesis factor.
   
 
 0.999
ENSGMOP00000003155
WD repeat domain 3.
   
0.999
ENSGMOP00000003787
NOP58 ribonucleoprotein homolog (yeast).
   
 
 0.999
ENSGMOP00000010030
WD repeat domain 36.
   
 0.999
ENSGMOP00000012350
annotation not available
   
 0.999
utp6
UTP6 small subunit processome component.
   
 0.999
ENSGMOP00000015307
UTP4 small subunit processome component.
   
 0.999
ENSGMOP00000015989
HEAT repeat containing 1.
   
 0.999
ENSGMOP00000017748
PWP2 small subunit processome component.
  
0.999
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.