STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012417nudE neurodevelopment protein 1-like 1b. (334 aa)    
Predicted Functional Partners:
ENSGMOP00000007408
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
    
 
 0.813
PAFAH1B1
Lissencephaly-1 homolog A.
    
 
 0.813
ENSGMOP00000020367
nudC nuclear distribution protein.
     
 0.762
ENSGMOP00000019930
DISC1 scaffold protein.
    
 
 0.729
ENSGMOP00000010132
TBC1 domain family, member 31.
    
 
 0.700
ENSGMOP00000010147
annotation not available
    
 
 0.695
ENSGMOP00000015625
NudC domain containing 3.
     
 0.681
ENSGMOP00000017592
NudC domain containing 2.
     
 0.681
ENSGMOP00000020472
BUB3 mitotic checkpoint protein.
     
 0.665
ENSGMOP00000012394
BUB1 mitotic checkpoint serine/threonine kinase Bb.
    
  0.642
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.