STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012471Kelch repeat and BTB (POZ) domain containing 7. (600 aa)    
Predicted Functional Partners:
CUL3
Cullin-3-like.
    
 0.890
ENSGMOP00000018480
Cullin 3b.
    
 0.890
ENSGMOP00000016285
Bardet-Biedl syndrome 1.
    
 0.817
ENSGMOP00000010359
annotation not available
    
 0.815
ENSGMOP00000002178
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.809
ENSGMOP00000009062
Bardet-Biedl syndrome 4.
    
 0.796
ttc8
Tetratricopeptide repeat domain 8.
    
 0.795
ENSGMOP00000002438
Kelch repeat and BTB (POZ) domain containing 8.
    
0.744
ENSGMOP00000013606
Bardet-Biedl syndrome 7.
   
 0.742
ENSGMOP00000011181
UBX domain protein 7.
    
  0.690
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.