STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERBP1SERPINE1 mRNA binding protein 1. (387 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
   0.994
ENSGMOP00000000826
Receptor for activated C kinase 1.
   
 
 0.979
rps3
Ribosomal protein S3.
   
 
 0.978
rpl15
Ribosomal protein L15.
   
   0.975
ENSGMOP00000016283
Ribosomal protein S5.
   
   0.965
RPS20
Ribosomal protein S20.
   
   0.964
rps2
Ribosomal protein S2.
   
   0.956
ENSGMOP00000015972
Ribosomal protein L23a.
   
   0.955
ENSGMOP00000018936
Ribosomal protein, large, P0.
   
   0.955
ENSGMOP00000019324
Ribosomal protein L32.
   
   0.955
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.