STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012689PAS domain containing serine/threonine kinase. (957 aa)    
Predicted Functional Partners:
ENSGMOP00000003648
UDP-glucose pyrophosphorylase 2a.
   
 
 0.702
ENSGMOP00000011662
annotation not available
   
 
 0.702
ENSGMOP00000014534
Intersectin 2b.
   
  0.658
ENSGMOP00000019906
Intersectin 2a.
   
  0.658
ENSGMOP00000019487
TNF receptor-associated factor 7.
   
 0.648
ENSGMOP00000011196
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
    
 0.641
ENSGMOP00000000456
Mindbomb E3 ubiquitin protein ligase 2.
    
  0.627
ENSGMOP00000001874
Transmembrane 9 superfamily member 1.
    
  0.623
ENSGMOP00000013739
annotation not available
   
  0.616
ENSGMOP00000000253
annotation not available
   
 0.588
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.