STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012856Cytochrome c oxidase assembly factor COX18. (282 aa)    
Predicted Functional Partners:
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 0.946
ENSGMOP00000009929
SEC61 translocon alpha 1 subunit, like.
   
 0.946
ENSGMOP00000012182
Signal recognition particle 54.
  
 0.938
ENSGMOP00000014172
SRP receptor subunit alpha.
  
 
 0.918
ENSGMOP00000007354
Mitochondrial ribosomal protein L45.
   
 
 0.908
ENSGMOP00000019509
Cytochrome c oxidase assembly homolog 15 (yeast).
     
 0.904
ENSGMOP00000014545
Mitochondrial ribosomal protein L17.
  
 
 0.869
ENSGMOP00000004771
Mitochondrial ribosomal protein L23.
   
 
 0.846
ENSGMOP00000008781
Mitochondrial ribosomal protein L12.
   
 
 0.845
ENSGMOP00000019739
Mitochondrial ribosomal protein L2.
   
 
 0.832
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.