STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012860annotation not available (282 aa)    
Predicted Functional Partners:
ENSGMOP00000003163
Potassium channel tetramerization domain containing 2.
    
 0.837
LOC115538019
SUMO-conjugating enzyme UBC9-like.
    
 0.837
ube2i
Ubiquitin conjugating enzyme E2 I.
    
 0.837
ENSGMOP00000006264
annotation not available
    
 0.815
ENSGMOP00000000319
Nuclear factor of activated T cells 2 interacting protein.
   
 0.791
ENSGMOP00000004173
annotation not available
    
 0.787
sumo2
Small ubiquitin like modifier 2.
    
 0.787
SUMO3
Small ubiquitin-related modifier 3.
    
 0.787
ENSGMOP00000020731
Small ubiquitin like modifier 3b.
    
 0.787
ENSGMOP00000000253
annotation not available
    
 0.752
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.