STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012863annotation not available (146 aa)    
Predicted Functional Partners:
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.810
ENSGMOP00000012733
Ribosomal protein S27a.
    
 0.766
ube2n
Ubiquitin conjugating enzyme E2 N.
   
 0.738
ENSGMOP00000011049
annotation not available
   
 0.738
ENSGMOP00000002802
Itchy E3 ubiquitin protein ligase b.
    
 0.705
ENSGMOP00000014161
Itchy E3 ubiquitin protein ligase a.
    
 0.705
ENSGMOP00000007083
Zinc finger, AN1-type domain 4.
   
 0.678
ENSGMOP00000020145
Tumor necrosis factor, alpha-induced protein 3.
   
 
 0.650
ENSGMOP00000004924
annotation not available
    
 0.642
ENSGMOP00000009483
Relaxin family peptide receptor 1.
    
 0.642
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.