STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012891Calmodulin regulated spectrin-associated protein family, member 2b. (1380 aa)    
Predicted Functional Partners:
ENSGMOP00000012897
WD repeat domain 47a.
 
 
 
 0.669
ENSGMOP00000001048
annotation not available
 
 
 
 0.535
ENSGMOP00000009601
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
   0.522
ENSGMOP00000014636
HESX homeobox 1.
   
   0.522
ENSGMOP00000009641
Pleckstrin homology domain containing, family A member 7b.
   
 
 0.446
ENSGMOP00000013677
Katanin p80 (WD repeat containing) subunit B 1.
    
 
 0.400
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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