STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A42Solute carrier family 25 member 42. (331 aa)    
Predicted Functional Partners:
ENSGMOP00000004806
Thymidine kinase 1, soluble.
  
 
 0.962
ENSGMOP00000005752
Thymidylate synthetase.
  
 0.945
ENSGMOP00000005330
annotation not available
  
 0.936
ENSGMOP00000005370
annotation not available
  
 0.936
ENSGMOP00000005311
annotation not available
  
 0.919
RRM1
Ribonucleotide reductase catalytic subunit M1.
  
 
 0.907
ENSGMOP00000019938
Ribonucleotide reductase M1 polypeptide.
  
 
 0.907
ENSGMOP00000006400
Replication factor C (activator 1) 3.
   
 
 0.906
ENSGMOP00000013212
Inosine triphosphatase (nucleoside triphosphate pyrophosphatase).
  
 0.906
ENSGMOP00000005867
Ribosomal protein L18.
 
 
    0.901
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.