STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012988annotation not available (652 aa)    
Predicted Functional Partners:
ENSGMOP00000005214
Retinoblastoma binding protein 4, like.
   
 0.858
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.858
ENSGMOP00000012523
annotation not available
   
 0.858
ENSGMOP00000003620
annotation not available
   
 0.850
ENSGMOP00000014584
Chromodomain helicase DNA binding protein 3.
   
 0.850
ENSGMOP00000019310
annotation not available
   
 0.850
ENSGMOP00000016904
Chromodomain helicase DNA binding protein 4a.
   
 0.849
ENSGMOP00000010189
PHD finger protein 21Ab.
   
 0.844
ENSGMOP00000000288
annotation not available
   
 0.834
ENSGMOP00000009568
methyl-CpG binding domain protein 3a.
   
 0.834
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.