STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012998Cold inducible RNA binding protein a. (185 aa)    
Predicted Functional Partners:
ENSGMOP00000010398
Heterogeneous nuclear ribonucleoprotein M.
   
 0.853
ENSGMOP00000010902
Heterogeneous nuclear ribonucleoprotein K.
   
 0.843
ENSGMOP00000015420
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.843
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.831
ENSGMOP00000011067
annotation not available
   
 0.757
ENSGMOP00000014063
annotation not available
   
 0.757
PABPN1L
PABPN1 like, cytoplasmic.
  
 0.734
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.732
ENSGMOP00000001887
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.730
ENSGMOP00000020046
Nuclear cap binding protein subunit 2.
   
0.730
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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