STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013139P21 protein (Cdc42/Rac)-activated kinase 1. (561 aa)    
Predicted Functional Partners:
ENSGMOP00000014534
Intersectin 2b.
    
 0.983
ENSGMOP00000019906
Intersectin 2a.
    
 0.983
LOC115540915
Cell division control protein 42 homolog.
   
 0.953
CDC42
Cell division cycle 42.
   
 0.953
ENSGMOP00000004809
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
    
 0.944
LOC115533026
Rho guanine nucleotide exchange factor 7-like.
    
 0.944
ENSGMOP00000004594
annotation not available
    
 0.943
LOC115553989
Cell division control protein 42 homolog.
   
 0.941
ENSGMOP00000000156
NCK adaptor protein 2b.
    
 0.906
ENSGMOP00000001795
NCK adaptor protein 1b.
    
 0.906
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.