STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013169annotation not available (450 aa)    
Predicted Functional Partners:
SMAD4
SMAD family member 4.
   
0.958
ENSGMOP00000014927
SMAD family member 4b.
   
0.958
ENSGMOP00000000295
annotation not available
   
0.950
ENSGMOP00000000182
Activin A receptor, type 1 like.
   
 0.941
ENSGMOP00000002601
Bone morphogenetic protein receptor, type IAa.
   
 0.918
ENSGMOP00000006114
annotation not available
   
 0.906
ENSGMOP00000015072
Bone morphogenetic protein receptor, type IBb.
   
 0.906
ENSGMOP00000004716
Activin A receptor like type 1.
   
 0.905
ENSGMOP00000020630
annotation not available
   
 0.905
ENSGMOP00000002984
Yes-associated protein 1.
    
 0.898
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.