STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013185Ribosomal protein S6 kinase, polypeptide 2. (730 aa)    
Predicted Functional Partners:
ENSGMOP00000010075
Mitogen-activated protein kinase 3.
   
0.919
mapk1
Mitogen-activated protein kinase 1.
   
0.919
ENSGMOP00000011404
TSC complex subunit 2.
    
 0.910
ENSGMOP00000005592
annotation not available
    
 0.870
ENSGMOP00000019710
TSC complex subunit 1b.
    
 0.870
ENSGMOP00000018754
Syntaxin 18.
    
 0.857
ENSGMOP00000018092
TBC1 domain family, member 7.
     
 0.856
ENSGMOP00000014343
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.855
ENSGMOP00000001229
RAD50 interactor 1.
    
 0.849
ENSGMOP00000019414
Activating transcription factor 4a.
     
 0.849
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.