STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013194Neuronal PAS domain protein 2. (532 aa)    
Predicted Functional Partners:
ENSGMOP00000009521
Aryl hydrocarbon receptor nuclear translocator-like 1a.
  
0.971
ENSGMOP00000004308
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
0.966
ENSGMOP00000017228
Cryptochrome circadian regulator 2.
   
 0.930
ENSGMOP00000011001
Period circadian clock 2.
    
 0.907
ENSGMOP00000011680
Cryptochrome DASH.
   
 0.905
ENSGMOP00000002345
Si:ch1073-390k14.1.
   
 0.904
ENSGMOP00000002236
Casein kinase 1, delta b.
    
 0.899
ENSGMOP00000010715
annotation not available
    
 0.899
PER2
Period circadian regulator 2.
    
0.895
ENSGMOP00000020291
Period circadian clock 1b.
    
0.891
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.