STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013204Transmembrane p24 trafficking protein 5. (201 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
 
 0.736
ENSGMOP00000019080
Transmembrane p24 trafficking protein 2.
   
 
0.673
ENSGMOP00000006595
Transmembrane p24 trafficking protein 4.
    
 
 0.594
ENSGMOP00000008872
Wingless-type MMTV integration site family, member 6b.
   
  0.592
ENSGMOP00000013019
Wingless-type MMTV integration site family, member 11.
   
  0.583
ENSGMOP00000005056
Wingless-type MMTV integration site family, member 1.
   
  0.582
ENSGMOP00000013446
Wingless-type MMTV integration site family, member 8b.
   
  0.582
ENSGMOP00000017461
Wingless-type MMTV integration site family, member 4.
   
  0.582
ENSGMOP00000018340
Wingless-type MMTV integration site family, member 16.
   
  0.582
ENSGMOP00000005069
Wingless-type MMTV integration site family, member 10b.
   
  0.563
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.