STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013257Calcium/calmodulin-dependent protein kinase II alpha. (492 aa)    
Predicted Functional Partners:
ENSGMOP00000007316
Calmodulin 2a (phosphorylase kinase, delta).
   
 0.893
calm1
Calmodulin 1.
   
 0.893
ENSGMOP00000020591
annotation not available
    
  0.885
ENSGMOP00000020597
annotation not available
    
  0.885
ENSGMOP00000018596
Membrane protein, palmitoylated 1.
 
  
  0.882
CALML3
Calmodulin like 3.
   
 0.872
ENSGMOP00000020594
annotation not available
   
 0.872
ENSGMOP00000009047
Calmodulin-like 4a.
    
 0.871
ENSGMOP00000009870
Lin-7 homolog A (C. elegans).
    
 0.836
ENSGMOP00000012288
Lin-7 homolog B (C. elegans).
    
 0.836
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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