STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (372 aa)    
Predicted Functional Partners:
ENSGMOP00000010398
Heterogeneous nuclear ribonucleoprotein M.
   
 0.811
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.803
ENSGMOP00000001887
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.783
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.783
ENSGMOP00000020046
Nuclear cap binding protein subunit 2.
   
 0.774
ENSGMOP00000010902
Heterogeneous nuclear ribonucleoprotein K.
   
 0.773
ENSGMOP00000015420
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.773
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.756
ENSGMOP00000014695
Transformer 2 alpha homolog.
   
 0.752
ENSGMOP00000020773
Transformer 2 beta homolog.
   
 0.752
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.