STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013293Synaptosome associated protein 25a. (204 aa)    
Predicted Functional Partners:
VAMP3
Vesicle associated membrane protein 3.
   
 0.979
LOC115553882
Vesicle-associated membrane protein 2-like.
   
 0.950
ENSGMOP00000018608
Vesicle-associated membrane protein 2.
   
 0.950
ENSGMOP00000020596
Complexin 2.
   
 0.948
ENSGMOP00000000586
Syntaxin 1A (brain).
   
 0.927
LOC115533324
syntaxin-1B.
   
 0.927
ENSGMOP00000007217
Syntaxin 2b.
   
 0.926
ENSGMOP00000015273
Syntaxin 3A.
   
 0.926
ENSGMOP00000009169
annotation not available
   
 0.900
ENSGMOP00000010801
Synaptotagmin IIa.
   
 0.900
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.