STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmb1Proteasome 20S subunit beta 1. (237 aa)    
Predicted Functional Partners:
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.999
psma8
Proteasome 20S subunit alpha 8.
   
 0.999
ENSGMOP00000003363
annotation not available
   
 0.999
ENSGMOP00000003571
Proteasome 26S subunit, ATPase 2.
   
 0.999
ENSGMOP00000004817
Proteasome 26S subunit, non-ATPase 7.
   
 0.999
ENSGMOP00000008409
Proteasome 26S subunit, non-ATPase 13.
   
 0.999
ENSGMOP00000009128
Proteasome 20S subunit beta 4.
   
 0.999
ENSGMOP00000009991
Proteasome 26S subunit, ATPase 1a.
   
 0.999
ENSGMOP00000010168
Proteasome 20S subunit beta 2.
   
0.999
ENSGMOP00000010221
Proteasome 20S subunit alpha 2.
   
 0.999
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.