STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX15DEAH-box helicase 15. (755 aa)    
Predicted Functional Partners:
ENSGMOP00000001946
UTP3 small subunit processome component.
   
 0.989
tfip11
Tuftelin interacting protein 11.
   
 0.981
ENSGMOP00000004792
Small nuclear ribonucleoprotein polypeptide A.
   
 0.980
ENSGMOP00000009032
RNA binding motif protein 17.
   
 0.979
ENSGMOP00000003787
NOP58 ribonucleoprotein homolog (yeast).
   
 
 0.976
ENSGMOP00000000886
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.973
ENSGMOP00000017496
Small nuclear ribonucleoprotein polypeptide E.
   
 0.969
ENSGMOP00000008279
Small nuclear ribonucleoprotein polypeptide F.
   
 0.968
ENSGMOP00000009063
Small nuclear ribonucleoprotein D3 polypeptide, like.
   
 0.966
ENSGMOP00000014791
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.965
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.